Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim9Q8C7M3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim9Q8C7M3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim9Q8C7M3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim9Q8C7M3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim9Q8C7M3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim9Q8C7M3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim9Q8C7M3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim9Q8C7M3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim9Q8C7M3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim9Q8C7M3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms