Protein–RNA interactions for Protein: Q8C5U9

Ubqln3, Ubiquilin-3, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3Q8C5U9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Phf7-203ENSMUST00000226565 1971 ntBASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ubqln3Q8C5U9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubqln3Q8C5U9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Gm11336-201ENSMUST00000118168 334 ntBASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ubqln3Q8C5U9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Gm13186-201ENSMUST00000118031 316 ntBASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Gm9013-201ENSMUST00000132939 882 ntBASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubqln3Q8C5U9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms