Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.7□□□□□ -0.22
Zim1Q8C393 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zim1Q8C393 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zim1Q8C393 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zim1Q8C393 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zim1Q8C393 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zim1Q8C393 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Zim1Q8C393 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zim1Q8C393 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zim1Q8C393 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Zim1Q8C393 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Zim1Q8C393 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.69□□□□□ -0.22
Zim1Q8C393 Gm11539-201ENSMUST00000119837 557 ntBASIC13.69□□□□□ -0.22
Zim1Q8C393 Gm13436-201ENSMUST00000120418 567 ntBASIC13.69□□□□□ -0.22
Zim1Q8C393 Gm7638-201ENSMUST00000121348 967 ntBASIC13.69□□□□□ -0.22
Zim1Q8C393 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.69□□□□□ -0.22
Zim1Q8C393 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Zim1Q8C393 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zim1Q8C393 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Zim1Q8C393 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.68□□□□□ -0.22
Zim1Q8C393 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.68□□□□□ -0.22
Zim1Q8C393 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Zim1Q8C393 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Zim1Q8C393 Gm6433-201ENSMUST00000118634 875 ntBASIC13.68□□□□□ -0.22
Zim1Q8C393 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Zim1Q8C393 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Zim1Q8C393 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.68□□□□□ -0.22
Zim1Q8C393 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Zim1Q8C393 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zim1Q8C393 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Zim1Q8C393 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.67□□□□□ -0.22
Zim1Q8C393 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Gm13836-201ENSMUST00000121159 501 ntBASIC13.67□□□□□ -0.22
Zim1Q8C393 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Zim1Q8C393 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Zim1Q8C393 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms