Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptcd1Q8C2E4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptcd1Q8C2E4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptcd1Q8C2E4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptcd1Q8C2E4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptcd1Q8C2E4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Mir3113-201ENSMUST00000175478 76 ntBASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptcd1Q8C2E4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Gm13216-201ENSMUST00000117145 591 ntBASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptcd1Q8C2E4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptcd1Q8C2E4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptcd1Q8C2E4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ptcd1Q8C2E4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptcd1Q8C2E4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms