Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpsf4Q8BQZ5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Gm13186-201ENSMUST00000118031 316 ntBASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Gm37722-201ENSMUST00000193757 208 ntBASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpsf4Q8BQZ5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Dancr-204ENSMUST00000132389 2347 ntBASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Gm9013-201ENSMUST00000132939 882 ntBASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpsf4Q8BQZ5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Gm25016-201ENSMUST00000158399 131 ntBASIC15.65■□□□□ 0.1
Cpsf4Q8BQZ5 Gm29518-201ENSMUST00000190858 372 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms