Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Gm37935-201ENSMUST00000192012 982 ntBASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usp1Q8BJQ2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Gm25990-201ENSMUST00000102440 86 ntBASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Gm12497-201ENSMUST00000138778 237 ntBASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Mir5126-201ENSMUST00000175513 77 ntBASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp1Q8BJQ2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Gm7230-201ENSMUST00000173026 815 ntBASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp1Q8BJQ2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.08■□□□□ 0.33
Usp1Q8BJQ2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp1Q8BJQ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp1Q8BJQ2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms