Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40bQ80W14 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40bQ80W14 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40bQ80W14 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Gm15590-201ENSMUST00000078419 552 ntBASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40bQ80W14 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40bQ80W14 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms