Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.48■□□□□ 0.07
Otop1Q80VM9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.48■□□□□ 0.07
Otop1Q80VM9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.48■□□□□ 0.07
Otop1Q80VM9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.48■□□□□ 0.07
Otop1Q80VM9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Otop1Q80VM9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Otop1Q80VM9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Otop1Q80VM9 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.46■□□□□ 0.07
Otop1Q80VM9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Otop1Q80VM9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Otop1Q80VM9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Otop1Q80VM9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Otop1Q80VM9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Otop1Q80VM9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Otop1Q80VM9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.45■□□□□ 0.06
Otop1Q80VM9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.45■□□□□ 0.06
Otop1Q80VM9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.45■□□□□ 0.06
Otop1Q80VM9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.45■□□□□ 0.06
Otop1Q80VM9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.45■□□□□ 0.06
Otop1Q80VM9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.44■□□□□ 0.06
Otop1Q80VM9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Gm13036-201ENSMUST00000117799 748 ntBASIC15.44■□□□□ 0.06
Otop1Q80VM9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.44■□□□□ 0.06
Otop1Q80VM9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms