Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh19Q80TF3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Gm18733-201ENSMUST00000173950 856 ntBASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh19Q80TF3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdh19Q80TF3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh19Q80TF3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gm9172-201ENSMUST00000212092 954 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms