Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga7Q6DD96 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Gm36967-201ENSMUST00000193814 266 ntBASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga7Q6DD96 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Gm29707-201ENSMUST00000196325 491 ntBASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga7Q6DD96 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Mir1668-201ENSMUST00000184114 107 ntBASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga7Q6DD96 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Gm26039-201ENSMUST00000158152 144 ntBASIC15.64■□□□□ 0.09
Pcdhga7Q6DD96 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms