Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.28□□□□□ -0.44
Zfp248Q640N4 Gm18959-201ENSMUST00000208954 655 ntBASIC12.28□□□□□ -0.44
Zfp248Q640N4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Gm10566-201ENSMUST00000086739 996 ntBASIC12.28□□□□□ -0.44
Zfp248Q640N4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Zfp248Q640N4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.27□□□□□ -0.44
Zfp248Q640N4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Zfp248Q640N4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Gm26039-201ENSMUST00000158152 144 ntBASIC12.27□□□□□ -0.45
Zfp248Q640N4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Gm45058-201ENSMUST00000205810 766 ntBASIC12.27□□□□□ -0.45
Zfp248Q640N4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.27□□□□□ -0.45
Zfp248Q640N4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Zfp248Q640N4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.26□□□□□ -0.45
Zfp248Q640N4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Gm7889-201ENSMUST00000185591 958 ntBASIC12.26□□□□□ -0.45
Zfp248Q640N4 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.26□□□□□ -0.45
Zfp248Q640N4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Zfp248Q640N4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms