Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Six1Q62231 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
Six1Q62231 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Six1Q62231 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Six1Q62231 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six1Q62231 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Six1Q62231 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Six1Q62231 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Six1Q62231 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Six1Q62231 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.53■□□□□ 0.24
Six1Q62231 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Six1Q62231 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.53■□□□□ 0.24
Six1Q62231 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.53■□□□□ 0.24
Six1Q62231 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.53■□□□□ 0.24
Six1Q62231 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six1Q62231 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Six1Q62231 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.52■□□□□ 0.24
Six1Q62231 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Six1Q62231 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Six1Q62231 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Six1Q62231 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.52■□□□□ 0.24
Six1Q62231 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.52■□□□□ 0.24
Six1Q62231 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.52■□□□□ 0.24
Six1Q62231 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.52■□□□□ 0.24
Six1Q62231 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six1Q62231 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.52■□□□□ 0.24
Six1Q62231 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Six1Q62231 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six1Q62231 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six1Q62231 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six1Q62231 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Six1Q62231 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Six1Q62231 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six1Q62231 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six1Q62231 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six1Q62231 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.51■□□□□ 0.23
Six1Q62231 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.51■□□□□ 0.23
Six1Q62231 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Six1Q62231 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.51■□□□□ 0.23
Six1Q62231 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.51■□□□□ 0.23
Six1Q62231 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Six1Q62231 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.51■□□□□ 0.23
Six1Q62231 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.51■□□□□ 0.23
Six1Q62231 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Six1Q62231 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six1Q62231 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Six1Q62231 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six1Q62231 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Six1Q62231 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms