Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn9aQ62205 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn9aQ62205 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.88■□□□□ 0.61
Scn9aQ62205 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scn9aQ62205 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.87■□□□□ 0.61
Scn9aQ62205 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Scn9aQ62205 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.87■□□□□ 0.61
Scn9aQ62205 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.87■□□□□ 0.61
Scn9aQ62205 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.87■□□□□ 0.61
Scn9aQ62205 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.87■□□□□ 0.61
Scn9aQ62205 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn9aQ62205 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn9aQ62205 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn9aQ62205 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.86■□□□□ 0.61
Scn9aQ62205 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.86■□□□□ 0.61
Scn9aQ62205 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.86■□□□□ 0.61
Scn9aQ62205 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.86■□□□□ 0.61
Scn9aQ62205 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.86■□□□□ 0.61
Scn9aQ62205 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn9aQ62205 Gm12428-201ENSMUST00000119844 727 ntBASIC18.86■□□□□ 0.61
Scn9aQ62205 Gm5745-201ENSMUST00000183748 313 ntBASIC18.86■□□□□ 0.61
Scn9aQ62205 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn9aQ62205 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn9aQ62205 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Gm27622-201ENSMUST00000183779 60 ntBASIC18.85■□□□□ 0.61
Scn9aQ62205 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.85■□□□□ 0.61
Scn9aQ62205 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn9aQ62205 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Gm27301-201ENSMUST00000184012 127 ntBASIC18.84■□□□□ 0.61
Scn9aQ62205 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scn9aQ62205 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Gm18489-201ENSMUST00000172565 551 ntBASIC18.84■□□□□ 0.61
Scn9aQ62205 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.84■□□□□ 0.61
Scn9aQ62205 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn9aQ62205 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Scn9aQ62205 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn9aQ62205 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn9aQ62205 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn9aQ62205 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Scn9aQ62205 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
Scn9aQ62205 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn9aQ62205 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn9aQ62205 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn9aQ62205 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.83■□□□□ 0.61
Scn9aQ62205 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.61
Scn9aQ62205 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn9aQ62205 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn9aQ62205 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.83■□□□□ 0.61
Scn9aQ62205 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Scn9aQ62205 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scn9aQ62205 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Scn9aQ62205 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn9aQ62205 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn9aQ62205 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn9aQ62205 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms