Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Tnfaip3Q60769 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Gm15165-201ENSMUST00000118140 502 ntBASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Gm34391-201ENSMUST00000203706 907 ntBASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.14■□□□□ 0.01
Tnfaip3Q60769 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfaip3Q60769 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Gm12644-201ENSMUST00000119935 606 ntBASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfaip3Q60769 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfaip3Q60769 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms