Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Gm12085-201ENSMUST00000119263 940 ntBASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv2-2Q5R1A4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Trmt13-210ENSMUST00000198454 880 ntBASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv2-2Q5R1A4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Gm7638-201ENSMUST00000121348 967 ntBASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trdv2-2Q5R1A4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms