Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm1Q52KI8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Gm27646-201ENSMUST00000183989 110 ntBASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Srrm1Q52KI8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Srrm1Q52KI8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Srrm1Q52KI8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Srrm1Q52KI8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Gm15920-201ENSMUST00000118998 402 ntBASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Mir8117-201ENSMUST00000184773 107 ntBASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.01■□□□□ 0.47
Srrm1Q52KI8 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Srrm1Q52KI8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Srrm1Q52KI8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18■□□□□ 0.47
Srrm1Q52KI8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18■□□□□ 0.47
Srrm1Q52KI8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18■□□□□ 0.47
Srrm1Q52KI8 Gm25406-201ENSMUST00000157599 105 ntBASIC18■□□□□ 0.47
Srrm1Q52KI8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18■□□□□ 0.47
Srrm1Q52KI8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18■□□□□ 0.47
Srrm1Q52KI8 Gm9172-201ENSMUST00000212092 954 ntBASIC18■□□□□ 0.47
Srrm1Q52KI8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18■□□□□ 0.47
Srrm1Q52KI8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm1Q52KI8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.99■□□□□ 0.47
Srrm1Q52KI8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srrm1Q52KI8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms