Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Gm6623-201ENSMUST00000173570 544 ntBASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Syne3Q4FZC9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Mir770-201ENSMUST00000103252 94 ntBASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.13■□□□□ 0.33
Syne3Q4FZC9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Syne3Q4FZC9 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Syne3Q4FZC9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Gm6345-202ENSMUST00000180900 204 ntBASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syne3Q4FZC9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syne3Q4FZC9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms