Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nr1d1Q3UV55 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Timm23-208ENSMUST00000226683 750 ntBASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Odf3b-204ENSMUST00000227834 930 ntBASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr1d1Q3UV55 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr1d1Q3UV55 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Asic1-205ENSMUST00000228185 1818 ntBASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Gm12382-201ENSMUST00000122005 922 ntBASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr1d1Q3UV55 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Gm27741-201ENSMUST00000185060 237 ntBASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr1d1Q3UV55 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms