Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.98□□□□□ -0.17
Q3U1D9 Gm7506-201ENSMUST00000207758 815 ntBASIC13.98□□□□□ -0.17
Q3U1D9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.98□□□□□ -0.17
Q3U1D9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.97□□□□□ -0.17
Q3U1D9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Q3U1D9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Gm25406-201ENSMUST00000157599 105 ntBASIC13.97□□□□□ -0.17
Q3U1D9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Q3U1D9 Gm4535-201ENSMUST00000182274 558 ntBASIC13.97□□□□□ -0.17
Q3U1D9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.97□□□□□ -0.17
Q3U1D9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Gm10355-201ENSMUST00000097146 517 ntBASIC13.97□□□□□ -0.17
Q3U1D9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Q3U1D9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.97□□□□□ -0.17
Q3U1D9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Q3U1D9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.97□□□□□ -0.17
Q3U1D9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.97□□□□□ -0.17
Q3U1D9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Q3U1D9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Q3U1D9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.96□□□□□ -0.17
Q3U1D9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.96□□□□□ -0.17
Q3U1D9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Q3U1D9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Gm2651-201ENSMUST00000203560 838 ntBASIC13.96□□□□□ -0.17
Q3U1D9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Q3U1D9 Gm10060-201ENSMUST00000212002 111 ntBASIC13.96□□□□□ -0.17
Q3U1D9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.96□□□□□ -0.17
Q3U1D9 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.96□□□□□ -0.17
Q3U1D9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Q3U1D9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Q3U1D9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Q3U1D9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Q3U1D9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Q3U1D9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.96□□□□□ -0.18
Q3U1D9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Gm4459-201ENSMUST00000118750 468 ntBASIC13.95□□□□□ -0.18
Q3U1D9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.95□□□□□ -0.18
Q3U1D9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Q3U1D9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.95□□□□□ -0.18
Q3U1D9 Mir6404-201ENSMUST00000183699 94 ntBASIC13.95□□□□□ -0.18
Q3U1D9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.95□□□□□ -0.18
Q3U1D9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.95□□□□□ -0.18
Q3U1D9 Gm8655-201ENSMUST00000221159 852 ntBASIC13.95□□□□□ -0.18
Q3U1D9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Q3U1D9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.95□□□□□ -0.18
Q3U1D9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.95□□□□□ -0.18
Q3U1D9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Q3U1D9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Q3U1D9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Q3U1D9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Q3U1D9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms