Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim43aQ3TL54 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Gm18115-201ENSMUST00000221209 621 ntBASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim43aQ3TL54 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Gm5417-201ENSMUST00000079706 384 ntBASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim43aQ3TL54 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Gm13836-201ENSMUST00000121159 501 ntBASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Gm36967-201ENSMUST00000193814 266 ntBASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim43aQ3TL54 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim43aQ3TL54 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms