Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.39□□□□□ -0.11
Chd8Q09XV5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Gm24694-201ENSMUST00000180054 110 ntBASIC14.39□□□□□ -0.11
Chd8Q09XV5 Gm27663-201ENSMUST00000184839 110 ntBASIC14.39□□□□□ -0.11
Chd8Q09XV5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.39□□□□□ -0.11
Chd8Q09XV5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Chd8Q09XV5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.38□□□□□ -0.11
Chd8Q09XV5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Gm27892-201ENSMUST00000185017 106 ntBASIC14.38□□□□□ -0.11
Chd8Q09XV5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.38□□□□□ -0.11
Chd8Q09XV5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd8Q09XV5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.37□□□□□ -0.11
Chd8Q09XV5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Gm18753-201ENSMUST00000201000 566 ntBASIC14.37□□□□□ -0.11
Chd8Q09XV5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.37□□□□□ -0.11
Chd8Q09XV5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.37□□□□□ -0.11
Chd8Q09XV5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd8Q09XV5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Gm15358-201ENSMUST00000119249 520 ntBASIC14.36□□□□□ -0.11
Chd8Q09XV5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.36□□□□□ -0.11
Chd8Q09XV5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Gm6415-201ENSMUST00000118488 348 ntBASIC14.36□□□□□ -0.11
Chd8Q09XV5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.36□□□□□ -0.11
Chd8Q09XV5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd8Q09XV5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Olfr582-201ENSMUST00000098212 960 ntBASIC14.35□□□□□ -0.11
Chd8Q09XV5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd8Q09XV5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms