Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col10a1Q05306 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.88□□□□□ -0.03
Col10a1Q05306 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col10a1Q05306 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.88□□□□□ -0.03
Col10a1Q05306 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col10a1Q05306 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col10a1Q05306 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col10a1Q05306 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col10a1Q05306 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.87□□□□□ -0.03
Col10a1Q05306 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.87□□□□□ -0.03
Col10a1Q05306 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Col10a1Q05306 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col10a1Q05306 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col10a1Q05306 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col10a1Q05306 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.86□□□□□ -0.03
Col10a1Q05306 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.86□□□□□ -0.03
Col10a1Q05306 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col10a1Q05306 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.86□□□□□ -0.03
Col10a1Q05306 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Col10a1Q05306 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.86□□□□□ -0.03
Col10a1Q05306 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.86□□□□□ -0.03
Col10a1Q05306 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col10a1Q05306 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col10a1Q05306 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.85□□□□□ -0.03
Col10a1Q05306 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Col10a1Q05306 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.85□□□□□ -0.03
Col10a1Q05306 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col10a1Q05306 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.84□□□□□ -0.03
Col10a1Q05306 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col10a1Q05306 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.84□□□□□ -0.03
Col10a1Q05306 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col10a1Q05306 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.84□□□□□ -0.03
Col10a1Q05306 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms