Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps45P97390 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps45P97390 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps45P97390 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps45P97390 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps45P97390 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Vps45P97390 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vps45P97390 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps45P97390 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps45P97390 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Vps45P97390 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps45P97390 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.64■□□□□ 0.25
Vps45P97390 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps45P97390 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.64■□□□□ 0.25
Vps45P97390 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps45P97390 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps45P97390 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vps45P97390 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Gm11452-201ENSMUST00000122376 690 ntBASIC16.63■□□□□ 0.25
Vps45P97390 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.63■□□□□ 0.25
Vps45P97390 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.63■□□□□ 0.25
Vps45P97390 Gm18206-201ENSMUST00000207027 926 ntBASIC16.63■□□□□ 0.25
Vps45P97390 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.63■□□□□ 0.25
Vps45P97390 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.63■□□□□ 0.25
Vps45P97390 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.63■□□□□ 0.25
Vps45P97390 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vps45P97390 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.63■□□□□ 0.25
Vps45P97390 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps45P97390 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps45P97390 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vps45P97390 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps45P97390 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.62■□□□□ 0.25
Vps45P97390 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.62■□□□□ 0.25
Vps45P97390 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.62■□□□□ 0.25
Vps45P97390 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vps45P97390 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps45P97390 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps45P97390 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vps45P97390 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps45P97390 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps45P97390 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms