Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Surf6P70279 Gm2559-201ENSMUST00000201323 363 ntBASIC16.81■□□□□ 0.28
Surf6P70279 Gm44549-201ENSMUST00000208351 577 ntBASIC16.81■□□□□ 0.28
Surf6P70279 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Surf6P70279 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Surf6P70279 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.81■□□□□ 0.28
Surf6P70279 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Surf6P70279 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Surf6P70279 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Surf6P70279 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Surf6P70279 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Surf6P70279 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Surf6P70279 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Surf6P70279 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Surf6P70279 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Gm12896-201ENSMUST00000118430 226 ntBASIC16.8■□□□□ 0.28
Surf6P70279 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Surf6P70279 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Surf6P70279 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Surf6P70279 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Surf6P70279 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.79■□□□□ 0.28
Surf6P70279 Gm11927-201ENSMUST00000118472 759 ntBASIC16.79■□□□□ 0.28
Surf6P70279 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Surf6P70279 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.79■□□□□ 0.28
Surf6P70279 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.79■□□□□ 0.28
Surf6P70279 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.79■□□□□ 0.28
Surf6P70279 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Surf6P70279 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.78■□□□□ 0.28
Surf6P70279 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Surf6P70279 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.78■□□□□ 0.28
Surf6P70279 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Surf6P70279 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Surf6P70279 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Surf6P70279 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Surf6P70279 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Surf6P70279 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Surf6P70279 Mtag2-201ENSMUST00000058665 714 ntBASIC16.77■□□□□ 0.28
Surf6P70279 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Surf6P70279 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Surf6P70279 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Surf6P70279 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Surf6P70279 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.77■□□□□ 0.27
Surf6P70279 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Surf6P70279 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Surf6P70279 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms