Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim4P70271 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim4P70271 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim4P70271 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Pdlim4P70271 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Pdlim4P70271 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Gm33142-201ENSMUST00000193913 867 ntBASIC13.42□□□□□ -0.26
Pdlim4P70271 Gm45328-201ENSMUST00000210942 917 ntBASIC13.42□□□□□ -0.26
Pdlim4P70271 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pdlim4P70271 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pdlim4P70271 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdlim4P70271 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pdlim4P70271 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.41□□□□□ -0.26
Pdlim4P70271 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Gm14859-201ENSMUST00000117752 357 ntBASIC13.41□□□□□ -0.26
Pdlim4P70271 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Pdlim4P70271 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pdlim4P70271 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdlim4P70271 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pdlim4P70271 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.4□□□□□ -0.26
Pdlim4P70271 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.4□□□□□ -0.26
Pdlim4P70271 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim4P70271 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pdlim4P70271 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim4P70271 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms