Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.54□□□□□ -0.56
Cks1bP61025 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.54□□□□□ -0.56
Cks1bP61025 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cks1bP61025 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.53□□□□□ -0.56
Cks1bP61025 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cks1bP61025 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Cks1bP61025 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Cks1bP61025 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cks1bP61025 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cks1bP61025 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1bP61025 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1bP61025 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1bP61025 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cks1bP61025 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Cks1bP61025 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Cks1bP61025 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cks1bP61025 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cks1bP61025 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cks1bP61025 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.52□□□□□ -0.57
Cks1bP61025 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.52□□□□□ -0.57
Cks1bP61025 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.52□□□□□ -0.57
Cks1bP61025 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cks1bP61025 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cks1bP61025 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cks1bP61025 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.51□□□□□ -0.57
Cks1bP61025 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.51□□□□□ -0.57
Cks1bP61025 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cks1bP61025 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms