Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.06■□□□□ 0.64
Irf5P56477 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.06■□□□□ 0.64
Irf5P56477 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.06■□□□□ 0.64
Irf5P56477 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf5P56477 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Irf5P56477 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf5P56477 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf5P56477 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf5P56477 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf5P56477 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Irf5P56477 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf5P56477 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf5P56477 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf5P56477 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf5P56477 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.05■□□□□ 0.64
Irf5P56477 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.05■□□□□ 0.64
Irf5P56477 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.05■□□□□ 0.64
Irf5P56477 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf5P56477 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Irf5P56477 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Irf5P56477 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC19.04■□□□□ 0.64
Irf5P56477 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC19.04■□□□□ 0.64
Irf5P56477 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Gm6296-201ENSMUST00000222599 943 ntBASIC19.04■□□□□ 0.64
Irf5P56477 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.04■□□□□ 0.64
Irf5P56477 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Irf5P56477 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Irf5P56477 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.04■□□□□ 0.64
Irf5P56477 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Irf5P56477 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.03■□□□□ 0.64
Irf5P56477 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.03■□□□□ 0.64
Irf5P56477 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Irf5P56477 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.03■□□□□ 0.64
Irf5P56477 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.03■□□□□ 0.64
Irf5P56477 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Irf5P56477 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Irf5P56477 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Irf5P56477 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Irf5P56477 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.02■□□□□ 0.64
Irf5P56477 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Gm6376-201ENSMUST00000209407 580 ntBASIC19.02■□□□□ 0.64
Irf5P56477 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Irf5P56477 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf5P56477 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf5P56477 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Irf5P56477 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf5P56477 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf5P56477 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf5P56477 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Irf5P56477 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Irf5P56477 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.01■□□□□ 0.63
Irf5P56477 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Gm44454-201ENSMUST00000198541 138 ntBASIC19.01■□□□□ 0.63
Irf5P56477 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.01■□□□□ 0.63
Irf5P56477 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf5P56477 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf5P56477 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms