Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.15■□□□□ 0.34
NrlP54846 Gm5264-201ENSMUST00000190584 848 ntBASIC17.15■□□□□ 0.34
NrlP54846 Psmb5-202ENSMUST00000227257 622 ntBASIC17.15■□□□□ 0.34
NrlP54846 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.15■□□□□ 0.34
NrlP54846 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NrlP54846 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
NrlP54846 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.14■□□□□ 0.33
NrlP54846 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.14■□□□□ 0.33
NrlP54846 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NrlP54846 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NrlP54846 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NrlP54846 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NrlP54846 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NrlP54846 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NrlP54846 Gm15173-201ENSMUST00000122049 433 ntBASIC17.13■□□□□ 0.33
NrlP54846 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
NrlP54846 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NrlP54846 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.13■□□□□ 0.33
NrlP54846 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.13■□□□□ 0.33
NrlP54846 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NrlP54846 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NrlP54846 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NrlP54846 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NrlP54846 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.12■□□□□ 0.33
NrlP54846 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.12■□□□□ 0.33
NrlP54846 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.12■□□□□ 0.33
NrlP54846 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.12■□□□□ 0.33
NrlP54846 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NrlP54846 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
NrlP54846 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NrlP54846 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
NrlP54846 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NrlP54846 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.11■□□□□ 0.33
NrlP54846 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NrlP54846 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.11■□□□□ 0.33
NrlP54846 Gm15467-201ENSMUST00000120582 445 ntBASIC17.11■□□□□ 0.33
NrlP54846 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.11■□□□□ 0.33
NrlP54846 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.11■□□□□ 0.33
NrlP54846 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
NrlP54846 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
NrlP54846 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NrlP54846 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NrlP54846 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NrlP54846 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms