Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.43■□□□□ 0.06
Sox18P43680 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Sox18P43680 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.42■□□□□ 0.06
Sox18P43680 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox18P43680 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Sox18P43680 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sox18P43680 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Sox18P43680 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.41■□□□□ 0.06
Sox18P43680 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.41■□□□□ 0.06
Sox18P43680 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.41■□□□□ 0.06
Sox18P43680 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sox18P43680 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.41■□□□□ 0.06
Sox18P43680 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox18P43680 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sox18P43680 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sox18P43680 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.4■□□□□ 0.06
Sox18P43680 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Sox18P43680 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.4■□□□□ 0.06
Sox18P43680 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox18P43680 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.4■□□□□ 0.06
Sox18P43680 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.4■□□□□ 0.06
Sox18P43680 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox18P43680 Gm8655-201ENSMUST00000221159 852 ntBASIC15.4■□□□□ 0.06
Sox18P43680 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.4■□□□□ 0.06
Sox18P43680 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.4■□□□□ 0.06
Sox18P43680 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Sox18P43680 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sox18P43680 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Sox18P43680 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.39■□□□□ 0.05
Sox18P43680 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.39■□□□□ 0.05
Sox18P43680 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.39■□□□□ 0.05
Sox18P43680 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.39■□□□□ 0.05
Sox18P43680 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.39■□□□□ 0.05
Sox18P43680 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.39■□□□□ 0.05
Sox18P43680 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.39■□□□□ 0.05
Sox18P43680 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Sox18P43680 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sox18P43680 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms