Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.11■□□□□ 0.49
Sdc2P43407 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sdc2P43407 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Sdc2P43407 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sdc2P43407 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.11■□□□□ 0.49
Sdc2P43407 Gm18959-201ENSMUST00000208954 655 ntBASIC18.11■□□□□ 0.49
Sdc2P43407 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sdc2P43407 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.11■□□□□ 0.49
Sdc2P43407 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sdc2P43407 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Sdc2P43407 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdc2P43407 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.1■□□□□ 0.49
Sdc2P43407 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.1■□□□□ 0.49
Sdc2P43407 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.1■□□□□ 0.49
Sdc2P43407 Gm43799-201ENSMUST00000201845 579 ntBASIC18.1■□□□□ 0.49
Sdc2P43407 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.1■□□□□ 0.49
Sdc2P43407 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sdc2P43407 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sdc2P43407 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Sdc2P43407 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.09■□□□□ 0.49
Sdc2P43407 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sdc2P43407 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.09■□□□□ 0.49
Sdc2P43407 Prob1-201ENSMUST00000097619 3021 ntBASIC18.09■□□□□ 0.49
Sdc2P43407 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sdc2P43407 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc2P43407 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc2P43407 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc2P43407 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc2P43407 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Sdc2P43407 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc2P43407 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc2P43407 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sdc2P43407 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.08■□□□□ 0.49
Sdc2P43407 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.08■□□□□ 0.48
Sdc2P43407 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.08■□□□□ 0.48
Sdc2P43407 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.08■□□□□ 0.48
Sdc2P43407 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.08■□□□□ 0.48
Sdc2P43407 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.08■□□□□ 0.48
Sdc2P43407 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.08■□□□□ 0.48
Sdc2P43407 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.08■□□□□ 0.48
Sdc2P43407 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.08■□□□□ 0.48
Sdc2P43407 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sdc2P43407 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sdc2P43407 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sdc2P43407 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms