Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RxrbP28704 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RxrbP28704 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RxrbP28704 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RxrbP28704 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Mir1199-201ENSMUST00000117015 119 ntBASIC16.22■□□□□ 0.19
RxrbP28704 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.22■□□□□ 0.19
RxrbP28704 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RxrbP28704 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.22■□□□□ 0.19
RxrbP28704 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.22■□□□□ 0.19
RxrbP28704 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RxrbP28704 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RxrbP28704 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.21■□□□□ 0.19
RxrbP28704 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.21■□□□□ 0.19
RxrbP28704 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RxrbP28704 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Gm36967-201ENSMUST00000193814 266 ntBASIC16.21■□□□□ 0.19
RxrbP28704 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.21■□□□□ 0.19
RxrbP28704 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.21■□□□□ 0.19
RxrbP28704 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RxrbP28704 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RxrbP28704 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RxrbP28704 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.21■□□□□ 0.18
RxrbP28704 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RxrbP28704 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RxrbP28704 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RxrbP28704 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RxrbP28704 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RxrbP28704 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RxrbP28704 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.2■□□□□ 0.18
RxrbP28704 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.2■□□□□ 0.18
RxrbP28704 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.2■□□□□ 0.18
RxrbP28704 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.2■□□□□ 0.18
RxrbP28704 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RxrbP28704 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.2■□□□□ 0.18
RxrbP28704 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RxrbP28704 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RxrbP28704 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RxrbP28704 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.2■□□□□ 0.18
RxrbP28704 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RxrbP28704 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RxrbP28704 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RxrbP28704 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RxrbP28704 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.19■□□□□ 0.18
RxrbP28704 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RxrbP28704 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RxrbP28704 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RxrbP28704 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RxrbP28704 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms