Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col2a1P28481 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.2■□□□□ 0.5
Col2a1P28481 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col2a1P28481 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.2■□□□□ 0.5
Col2a1P28481 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col2a1P28481 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col2a1P28481 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.2■□□□□ 0.5
Col2a1P28481 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col2a1P28481 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col2a1P28481 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.19■□□□□ 0.5
Col2a1P28481 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.19■□□□□ 0.5
Col2a1P28481 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Gm13597-201ENSMUST00000121239 375 ntBASIC18.19■□□□□ 0.5
Col2a1P28481 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.19■□□□□ 0.5
Col2a1P28481 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.19■□□□□ 0.5
Col2a1P28481 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col2a1P28481 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col2a1P28481 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Mir3113-201ENSMUST00000175478 76 ntBASIC18.18■□□□□ 0.5
Col2a1P28481 Gm27702-201ENSMUST00000184512 56 ntBASIC18.18■□□□□ 0.5
Col2a1P28481 Gm2756-201ENSMUST00000195851 400 ntBASIC18.18■□□□□ 0.5
Col2a1P28481 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col2a1P28481 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col2a1P28481 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col2a1P28481 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col2a1P28481 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col2a1P28481 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.17■□□□□ 0.5
Col2a1P28481 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.17■□□□□ 0.5
Col2a1P28481 Gm2213-201ENSMUST00000197485 688 ntBASIC18.17■□□□□ 0.5
Col2a1P28481 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.17■□□□□ 0.5
Col2a1P28481 Gm7787-201ENSMUST00000216858 688 ntBASIC18.17■□□□□ 0.5
Col2a1P28481 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.17■□□□□ 0.5
Col2a1P28481 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col2a1P28481 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col2a1P28481 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col2a1P28481 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.17■□□□□ 0.5
Col2a1P28481 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col2a1P28481 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col2a1P28481 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col2a1P28481 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col2a1P28481 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.16■□□□□ 0.5
Col2a1P28481 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.16■□□□□ 0.5
Col2a1P28481 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.16■□□□□ 0.5
Col2a1P28481 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Col2a1P28481 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.16■□□□□ 0.5
Col2a1P28481 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col2a1P28481 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.15■□□□□ 0.5
Col2a1P28481 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col2a1P28481 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.15■□□□□ 0.5
Col2a1P28481 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.15■□□□□ 0.5
Col2a1P28481 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col2a1P28481 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col2a1P28481 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col2a1P28481 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col2a1P28481 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.5
Col2a1P28481 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col2a1P28481 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col2a1P28481 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms