Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TpbpaP13438 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.67□□□□□ -0.06
TpbpaP13438 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.67□□□□□ -0.06
TpbpaP13438 Gm7791-201ENSMUST00000219066 539 ntBASIC14.67□□□□□ -0.06
TpbpaP13438 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TpbpaP13438 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TpbpaP13438 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TpbpaP13438 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
TpbpaP13438 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.66□□□□□ -0.06
TpbpaP13438 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TpbpaP13438 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Gm13168-201ENSMUST00000121771 632 ntBASIC14.66□□□□□ -0.06
TpbpaP13438 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.66□□□□□ -0.06
TpbpaP13438 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TpbpaP13438 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.66□□□□□ -0.06
TpbpaP13438 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TpbpaP13438 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TpbpaP13438 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TpbpaP13438 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.65□□□□□ -0.06
TpbpaP13438 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TpbpaP13438 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TpbpaP13438 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.65□□□□□ -0.06
TpbpaP13438 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TpbpaP13438 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TpbpaP13438 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TpbpaP13438 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.65□□□□□ -0.06
TpbpaP13438 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TpbpaP13438 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TpbpaP13438 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
TpbpaP13438 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.64□□□□□ -0.07
TpbpaP13438 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Gm10653-202ENSMUST00000139570 835 ntBASIC14.64□□□□□ -0.07
TpbpaP13438 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.64□□□□□ -0.07
TpbpaP13438 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TpbpaP13438 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.64□□□□□ -0.07
TpbpaP13438 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
TpbpaP13438 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TpbpaP13438 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TpbpaP13438 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TpbpaP13438 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.63□□□□□ -0.07
TpbpaP13438 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TpbpaP13438 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms