Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col3a1P08121 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Col3a1P08121 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.15■□□□□ 0.66
Col3a1P08121 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.15■□□□□ 0.66
Col3a1P08121 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.15■□□□□ 0.66
Col3a1P08121 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.15■□□□□ 0.66
Col3a1P08121 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.15■□□□□ 0.66
Col3a1P08121 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col3a1P08121 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col3a1P08121 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Col3a1P08121 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.14■□□□□ 0.65
Col3a1P08121 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.14■□□□□ 0.65
Col3a1P08121 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.14■□□□□ 0.65
Col3a1P08121 Gm25911-201ENSMUST00000157621 56 ntBASIC19.14■□□□□ 0.65
Col3a1P08121 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.14■□□□□ 0.65
Col3a1P08121 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.14■□□□□ 0.65
Col3a1P08121 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
Col3a1P08121 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.14■□□□□ 0.65
Col3a1P08121 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col3a1P08121 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.13■□□□□ 0.65
Col3a1P08121 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.13■□□□□ 0.65
Col3a1P08121 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col3a1P08121 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col3a1P08121 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col3a1P08121 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.12■□□□□ 0.65
Col3a1P08121 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col3a1P08121 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.12■□□□□ 0.65
Col3a1P08121 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.12■□□□□ 0.65
Col3a1P08121 Gm2756-201ENSMUST00000195851 400 ntBASIC19.12■□□□□ 0.65
Col3a1P08121 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col3a1P08121 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col3a1P08121 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.11■□□□□ 0.65
Col3a1P08121 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.11■□□□□ 0.65
Col3a1P08121 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col3a1P08121 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.11■□□□□ 0.65
Col3a1P08121 Gm6736-201ENSMUST00000166583 948 ntBASIC19.11■□□□□ 0.65
Col3a1P08121 Gm19164-201ENSMUST00000210667 640 ntBASIC19.11■□□□□ 0.65
Col3a1P08121 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col3a1P08121 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.11■□□□□ 0.65
Col3a1P08121 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col3a1P08121 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Col3a1P08121 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col3a1P08121 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.1■□□□□ 0.65
Col3a1P08121 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms