Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CopeO89079 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CopeO89079 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CopeO89079 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.66■□□□□ 0.26
CopeO89079 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CopeO89079 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CopeO89079 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Gm44450-201ENSMUST00000199528 114 ntBASIC16.66■□□□□ 0.26
CopeO89079 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.66■□□□□ 0.26
CopeO89079 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CopeO89079 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CopeO89079 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.65■□□□□ 0.26
CopeO89079 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.65■□□□□ 0.26
CopeO89079 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Gm11539-201ENSMUST00000119837 557 ntBASIC16.65■□□□□ 0.26
CopeO89079 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.65■□□□□ 0.26
CopeO89079 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.65■□□□□ 0.26
CopeO89079 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.65■□□□□ 0.26
CopeO89079 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CopeO89079 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CopeO89079 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.64■□□□□ 0.26
CopeO89079 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.64■□□□□ 0.25
CopeO89079 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.64■□□□□ 0.25
CopeO89079 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.64■□□□□ 0.25
CopeO89079 Gm10653-202ENSMUST00000139570 835 ntBASIC16.64■□□□□ 0.25
CopeO89079 Gm36967-201ENSMUST00000193814 266 ntBASIC16.64■□□□□ 0.25
CopeO89079 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.64■□□□□ 0.25
CopeO89079 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.64■□□□□ 0.25
CopeO89079 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CopeO89079 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CopeO89079 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CopeO89079 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CopeO89079 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.64■□□□□ 0.25
CopeO89079 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CopeO89079 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.63■□□□□ 0.25
CopeO89079 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CopeO89079 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CopeO89079 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms