Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Gm13186-201ENSMUST00000118031 316 ntBASIC11.44□□□□□ -0.58
Sh2d1aO88890 Gm13474-201ENSMUST00000122466 815 ntBASIC11.44□□□□□ -0.58
Sh2d1aO88890 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Mir5130-201ENSMUST00000175160 84 ntBASIC11.44□□□□□ -0.58
Sh2d1aO88890 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Actl10-202ENSMUST00000226583 1501 ntBASIC11.44□□□□□ -0.58
Sh2d1aO88890 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh2d1aO88890 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.43□□□□□ -0.58
Sh2d1aO88890 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Gm18959-201ENSMUST00000208954 655 ntBASIC11.43□□□□□ -0.58
Sh2d1aO88890 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sh2d1aO88890 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.42□□□□□ -0.58
Sh2d1aO88890 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh2d1aO88890 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms