Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.51■□□□□ 0.55
Becn1O88597 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Becn1O88597 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Becn1O88597 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.51■□□□□ 0.55
Becn1O88597 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Sybu-209ENSMUST00000228639 4113 ntBASIC18.5■□□□□ 0.55
Becn1O88597 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Becn1O88597 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Becn1O88597 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.5■□□□□ 0.55
Becn1O88597 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Becn1O88597 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Becn1O88597 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.5■□□□□ 0.55
Becn1O88597 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Becn1O88597 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Gm37912-201ENSMUST00000191895 3076 ntBASIC18.5■□□□□ 0.55
Becn1O88597 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Becn1O88597 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Becn1O88597 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.49■□□□□ 0.55
Becn1O88597 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.49■□□□□ 0.55
Becn1O88597 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.49■□□□□ 0.55
Becn1O88597 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.49■□□□□ 0.55
Becn1O88597 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Becn1O88597 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Becn1O88597 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Becn1O88597 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.49■□□□□ 0.55
Becn1O88597 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Becn1O88597 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Becn1O88597 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.48■□□□□ 0.55
Becn1O88597 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.48■□□□□ 0.55
Becn1O88597 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.48■□□□□ 0.55
Becn1O88597 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.48■□□□□ 0.55
Becn1O88597 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.48■□□□□ 0.55
Becn1O88597 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Becn1O88597 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Becn1O88597 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Becn1O88597 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Becn1O88597 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Becn1O88597 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Becn1O88597 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Becn1O88597 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.47■□□□□ 0.55
Becn1O88597 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Becn1O88597 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Becn1O88597 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms