Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pknox1O70477 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pknox1O70477 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.05■□□□□ 0.16
Pknox1O70477 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.05■□□□□ 0.16
Pknox1O70477 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pknox1O70477 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.05■□□□□ 0.16
Pknox1O70477 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pknox1O70477 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Gm26039-201ENSMUST00000158152 144 ntBASIC16.04■□□□□ 0.16
Pknox1O70477 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Mir5130-201ENSMUST00000175160 84 ntBASIC16.04■□□□□ 0.16
Pknox1O70477 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.04■□□□□ 0.16
Pknox1O70477 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pknox1O70477 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pknox1O70477 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pknox1O70477 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pknox1O70477 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.03■□□□□ 0.16
Pknox1O70477 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.03■□□□□ 0.16
Pknox1O70477 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Pknox1O70477 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pknox1O70477 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.03■□□□□ 0.16
Pknox1O70477 Gm45058-201ENSMUST00000205810 766 ntBASIC16.03■□□□□ 0.16
Pknox1O70477 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.03■□□□□ 0.16
Pknox1O70477 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.03■□□□□ 0.16
Pknox1O70477 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.03■□□□□ 0.16
Pknox1O70477 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pknox1O70477 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pknox1O70477 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.03■□□□□ 0.16
Pknox1O70477 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pknox1O70477 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.02■□□□□ 0.16
Pknox1O70477 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pknox1O70477 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Pknox1O70477 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.02■□□□□ 0.16
Pknox1O70477 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pknox1O70477 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pknox1O70477 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pknox1O70477 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pknox1O70477 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms