Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vamp8O70404 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vamp8O70404 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vamp8O70404 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Vamp8O70404 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.38□□□□□ -0.59
Vamp8O70404 App-207ENSMUST00000227737 2827 ntBASIC11.38□□□□□ -0.59
Vamp8O70404 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Vamp8O70404 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vamp8O70404 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Vamp8O70404 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Vamp8O70404 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Smad6-203ENSMUST00000179458 273 ntBASIC11.38□□□□□ -0.59
Vamp8O70404 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.38□□□□□ -0.59
Vamp8O70404 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vamp8O70404 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vamp8O70404 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vamp8O70404 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Vamp8O70404 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vamp8O70404 Phf7-203ENSMUST00000226565 1971 ntBASIC11.37□□□□□ -0.59
Vamp8O70404 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Vamp8O70404 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.37□□□□□ -0.59
Vamp8O70404 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.37□□□□□ -0.59
Vamp8O70404 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.37□□□□□ -0.59
Vamp8O70404 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.37□□□□□ -0.59
Vamp8O70404 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.37□□□□□ -0.59
Vamp8O70404 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.37□□□□□ -0.59
Vamp8O70404 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vamp8O70404 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.37□□□□□ -0.59
Vamp8O70404 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vamp8O70404 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vamp8O70404 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Vamp8O70404 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.36□□□□□ -0.59
Vamp8O70404 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.36□□□□□ -0.59
Vamp8O70404 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vamp8O70404 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Vamp8O70404 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 Gm12251-201ENSMUST00000117893 792 ntBASIC11.36□□□□□ -0.59
Vamp8O70404 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.36□□□□□ -0.59
Vamp8O70404 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.36□□□□□ -0.59
Vamp8O70404 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.36□□□□□ -0.59
Vamp8O70404 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vamp8O70404 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.36□□□□□ -0.59
Vamp8O70404 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms