Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.84■□□□□ 0.29
Per2O54943 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.84■□□□□ 0.29
Per2O54943 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.84■□□□□ 0.29
Per2O54943 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Per2O54943 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Per2O54943 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Per2O54943 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Per2O54943 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Per2O54943 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.83■□□□□ 0.29
Per2O54943 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Per2O54943 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.83■□□□□ 0.29
Per2O54943 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.83■□□□□ 0.29
Per2O54943 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Per2O54943 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.83■□□□□ 0.28
Per2O54943 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.83■□□□□ 0.28
Per2O54943 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Per2O54943 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Per2O54943 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Per2O54943 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
Per2O54943 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Per2O54943 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Gm9013-201ENSMUST00000132939 882 ntBASIC16.82■□□□□ 0.28
Per2O54943 Gm10052-201ENSMUST00000168019 960 ntBASIC16.82■□□□□ 0.28
Per2O54943 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Gm7729-201ENSMUST00000050143 801 ntBASIC16.82■□□□□ 0.28
Per2O54943 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Per2O54943 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Per2O54943 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Per2O54943 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Per2O54943 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Per2O54943 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per2O54943 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.81■□□□□ 0.28
Per2O54943 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per2O54943 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per2O54943 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per2O54943 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Per2O54943 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Per2O54943 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.81■□□□□ 0.28
Per2O54943 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Per2O54943 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.81■□□□□ 0.28
Per2O54943 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Per2O54943 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.81■□□□□ 0.28
Per2O54943 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per2O54943 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Per2O54943 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Per2O54943 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Per2O54943 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.8■□□□□ 0.28
Per2O54943 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.8■□□□□ 0.28
Per2O54943 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.8■□□□□ 0.28
Per2O54943 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Per2O54943 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Per2O54943 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Per2O54943 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.8■□□□□ 0.28
Per2O54943 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Per2O54943 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms