Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.26□□□□□ -0.13
Dkk1O54908 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Dkk1O54908 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.26□□□□□ -0.13
Dkk1O54908 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dkk1O54908 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dkk1O54908 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.26□□□□□ -0.13
Dkk1O54908 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.25□□□□□ -0.13
Dkk1O54908 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Dkk1O54908 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.25□□□□□ -0.13
Dkk1O54908 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Dkk1O54908 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.25□□□□□ -0.13
Dkk1O54908 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Gm14975-201ENSMUST00000118741 664 ntBASIC14.25□□□□□ -0.13
Dkk1O54908 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.25□□□□□ -0.13
Dkk1O54908 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Gm9013-201ENSMUST00000132939 882 ntBASIC14.25□□□□□ -0.13
Dkk1O54908 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.25□□□□□ -0.13
Dkk1O54908 Gm29707-201ENSMUST00000196325 491 ntBASIC14.25□□□□□ -0.13
Dkk1O54908 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Gm18421-201ENSMUST00000204122 625 ntBASIC14.25□□□□□ -0.13
Dkk1O54908 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Gm18597-201ENSMUST00000209519 694 ntBASIC14.25□□□□□ -0.13
Dkk1O54908 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.25□□□□□ -0.13
Dkk1O54908 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.25□□□□□ -0.13
Dkk1O54908 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dkk1O54908 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Dkk1O54908 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 AC163296.2-201ENSMUST00000220177 1315 ntBASIC14.24□□□□□ -0.13
Dkk1O54908 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.24□□□□□ -0.13
Dkk1O54908 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Dkk1O54908 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Gm23634-201ENSMUST00000175071 91 ntBASIC14.24□□□□□ -0.13
Dkk1O54908 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.24□□□□□ -0.13
Dkk1O54908 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC14.24□□□□□ -0.13
Dkk1O54908 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Dkk1O54908 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.24□□□□□ -0.13
Dkk1O54908 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Dkk1O54908 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Dkk1O54908 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dkk1O54908 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Dkk1O54908 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Dkk1O54908 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Gm19210-201ENSMUST00000199562 1350 ntBASIC14.23□□□□□ -0.13
Dkk1O54908 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.23□□□□□ -0.13
Dkk1O54908 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Dkk1O54908 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Dkk1O54908 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Dkk1O54908 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dkk1O54908 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC14.23□□□□□ -0.13
Dkk1O54908 Gm15937-201ENSMUST00000120727 1235 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms