Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Gm13453-201ENSMUST00000118708 357 ntBASIC15.1■□□□□ 0.01
Abca4O35600 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.1■□□□□ 0.01
Abca4O35600 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Abca4O35600 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.09■□□□□ 0.01
Abca4O35600 Gm15358-201ENSMUST00000119249 520 ntBASIC15.09■□□□□ 0.01
Abca4O35600 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Abca4O35600 Gm10253-201ENSMUST00000194270 940 ntBASIC15.09■□□□□ 0.01
Abca4O35600 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.09■□□□□ 0.01
Abca4O35600 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.09■□□□□ 0.01
Abca4O35600 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.09■□□□□ 0.01
Abca4O35600 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.09■□□□□ 0.01
Abca4O35600 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.09■□□□□ 0.01
Abca4O35600 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abca4O35600 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Abca4O35600 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Abca4O35600 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Abca4O35600 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Abca4O35600 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Abca4O35600 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Abca4O35600 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Abca4O35600 Gm13829-201ENSMUST00000119600 138 ntBASIC15.08■□□□□ 0
Abca4O35600 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.08■□□□□ 0
Abca4O35600 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Abca4O35600 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.08■□□□□ 0
Abca4O35600 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.08■□□□□ 0
Abca4O35600 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Abca4O35600 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.08■□□□□ 0
Abca4O35600 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.08■□□□□ 0
Abca4O35600 Gm9682-201ENSMUST00000197505 556 ntBASIC15.08■□□□□ 0
Abca4O35600 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abca4O35600 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Abca4O35600 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Abca4O35600 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.07■□□□□ 0
Abca4O35600 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Abca4O35600 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.07■□□□□ 0
Abca4O35600 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.07■□□□□ 0
Abca4O35600 Gm45384-201ENSMUST00000210451 277 ntBASIC15.07■□□□□ 0
Abca4O35600 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.07■□□□□ 0
Abca4O35600 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.07■□□□□ 0
Abca4O35600 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Abca4O35600 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abca4O35600 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Abca4O35600 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.06■□□□□ 0
Abca4O35600 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 Mir1247-201ENSMUST00000116706 82 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Abca4O35600 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abca4O35600 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.06■□□□□ 0
Abca4O35600 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms