Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Gm18421-201ENSMUST00000204122 625 ntBASIC18.16■□□□□ 0.5
Stx1aO35526 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.16■□□□□ 0.5
Stx1aO35526 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.16■□□□□ 0.5
Stx1aO35526 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Stx1aO35526 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Stx1aO35526 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Stx1aO35526 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.16■□□□□ 0.5
Stx1aO35526 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Stx1aO35526 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Stx1aO35526 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.15■□□□□ 0.5
Stx1aO35526 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Stx1aO35526 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Stx1aO35526 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.15■□□□□ 0.5
Stx1aO35526 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.15■□□□□ 0.5
Stx1aO35526 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Stx1aO35526 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.15■□□□□ 0.5
Stx1aO35526 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.15■□□□□ 0.5
Stx1aO35526 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.15■□□□□ 0.5
Stx1aO35526 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Stx1aO35526 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Stx1aO35526 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.14■□□□□ 0.5
Stx1aO35526 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.14■□□□□ 0.49
Stx1aO35526 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.14■□□□□ 0.49
Stx1aO35526 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.14■□□□□ 0.49
Stx1aO35526 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Gm27463-201ENSMUST00000183569 57 ntBASIC18.14■□□□□ 0.49
Stx1aO35526 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.14■□□□□ 0.49
Stx1aO35526 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.14■□□□□ 0.49
Stx1aO35526 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Stx1aO35526 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.14■□□□□ 0.49
Stx1aO35526 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Stx1aO35526 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.13■□□□□ 0.49
Stx1aO35526 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.13■□□□□ 0.49
Stx1aO35526 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Stx1aO35526 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.13■□□□□ 0.49
Stx1aO35526 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.13■□□□□ 0.49
Stx1aO35526 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Stx1aO35526 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Stx1aO35526 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.13■□□□□ 0.49
Stx1aO35526 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.12■□□□□ 0.49
Stx1aO35526 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Stx1aO35526 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms