Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Clcn6O35454 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Mir6982-201ENSMUST00000184354 68 ntBASIC17.34■□□□□ 0.37
Clcn6O35454 Gm28923-201ENSMUST00000187755 322 ntBASIC17.34■□□□□ 0.37
Clcn6O35454 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcn6O35454 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcn6O35454 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcn6O35454 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC17.34■□□□□ 0.37
Clcn6O35454 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.34■□□□□ 0.37
Clcn6O35454 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clcn6O35454 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn6O35454 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Clcn6O35454 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Clcn6O35454 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn6O35454 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.33■□□□□ 0.37
Clcn6O35454 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn6O35454 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn6O35454 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC17.33■□□□□ 0.37
Clcn6O35454 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn6O35454 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn6O35454 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.33■□□□□ 0.36
Clcn6O35454 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC17.33■□□□□ 0.36
Clcn6O35454 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.33■□□□□ 0.36
Clcn6O35454 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC17.33■□□□□ 0.36
Clcn6O35454 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.33■□□□□ 0.36
Clcn6O35454 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.33■□□□□ 0.36
Clcn6O35454 Gm10517-202ENSMUST00000192970 758 ntBASIC17.33■□□□□ 0.36
Clcn6O35454 AC129017.2-201ENSMUST00000226118 1284 ntBASIC17.33■□□□□ 0.36
Clcn6O35454 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.33■□□□□ 0.36
Clcn6O35454 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn6O35454 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clcn6O35454 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.32■□□□□ 0.36
Clcn6O35454 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Clcn6O35454 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcn6O35454 Gm25507-201ENSMUST00000116981 144 ntBASIC17.32■□□□□ 0.36
Clcn6O35454 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Clcn6O35454 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clcn6O35454 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcn6O35454 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Clcn6O35454 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn6O35454 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn6O35454 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcn6O35454 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.31■□□□□ 0.36
Clcn6O35454 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clcn6O35454 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.31■□□□□ 0.36
Clcn6O35454 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcn6O35454 Gm20239-201ENSMUST00000196610 982 ntBASIC17.31■□□□□ 0.36
Clcn6O35454 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcn6O35454 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.31■□□□□ 0.36
Clcn6O35454 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC17.31■□□□□ 0.36
Clcn6O35454 AC121986.1-201ENSMUST00000218588 781 ntBASIC17.31■□□□□ 0.36
Clcn6O35454 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Clcn6O35454 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcn6O35454 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.31■□□□□ 0.36
Clcn6O35454 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn6O35454 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
Clcn6O35454 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcn6O35454 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms