Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Efnb3O35393 App-207ENSMUST00000227737 2827 ntBASIC12.77□□□□□ -0.36
Efnb3O35393 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Efnb3O35393 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.77□□□□□ -0.37
Efnb3O35393 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Efnb3O35393 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.77□□□□□ -0.37
Efnb3O35393 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.77□□□□□ -0.37
Efnb3O35393 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Efnb3O35393 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Efnb3O35393 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.76□□□□□ -0.37
Efnb3O35393 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.76□□□□□ -0.37
Efnb3O35393 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.76□□□□□ -0.37
Efnb3O35393 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Efnb3O35393 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Efnb3O35393 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Efnb3O35393 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Efnb3O35393 Actl10-202ENSMUST00000226583 1501 ntBASIC12.76□□□□□ -0.37
Efnb3O35393 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Efnb3O35393 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Efnb3O35393 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Efnb3O35393 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Efnb3O35393 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Efnb3O35393 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.75□□□□□ -0.37
Efnb3O35393 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Mir1199-201ENSMUST00000117015 119 ntBASIC12.75□□□□□ -0.37
Efnb3O35393 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Efnb3O35393 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.75□□□□□ -0.37
Efnb3O35393 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.75□□□□□ -0.37
Efnb3O35393 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Efnb3O35393 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Efnb3O35393 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Efnb3O35393 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Efnb3O35393 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms