Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
AlyrefO08583 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
AlyrefO08583 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
AlyrefO08583 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.27■□□□□ 0.2
AlyrefO08583 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.27■□□□□ 0.2
AlyrefO08583 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.27■□□□□ 0.2
AlyrefO08583 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
AlyrefO08583 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.27■□□□□ 0.2
AlyrefO08583 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.27■□□□□ 0.2
AlyrefO08583 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.27■□□□□ 0.2
AlyrefO08583 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AlyrefO08583 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
AlyrefO08583 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AlyrefO08583 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AlyrefO08583 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
AlyrefO08583 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AlyrefO08583 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AlyrefO08583 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AlyrefO08583 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
AlyrefO08583 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AlyrefO08583 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.26■□□□□ 0.19
AlyrefO08583 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AlyrefO08583 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.26■□□□□ 0.19
AlyrefO08583 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.26■□□□□ 0.19
AlyrefO08583 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Gm7222-201ENSMUST00000117512 906 ntBASIC16.26■□□□□ 0.19
AlyrefO08583 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Gm43433-201ENSMUST00000196573 481 ntBASIC16.26■□□□□ 0.19
AlyrefO08583 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.26■□□□□ 0.19
AlyrefO08583 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.26■□□□□ 0.19
AlyrefO08583 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.26■□□□□ 0.19
AlyrefO08583 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AlyrefO08583 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AlyrefO08583 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AlyrefO08583 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.25■□□□□ 0.19
AlyrefO08583 Mir1895-201ENSMUST00000122615 79 ntBASIC16.25■□□□□ 0.19
AlyrefO08583 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.25■□□□□ 0.19
AlyrefO08583 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AlyrefO08583 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.24■□□□□ 0.19
AlyrefO08583 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
AlyrefO08583 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.24■□□□□ 0.19
AlyrefO08583 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.24■□□□□ 0.19
AlyrefO08583 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.24■□□□□ 0.19
AlyrefO08583 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.24■□□□□ 0.19
AlyrefO08583 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.24■□□□□ 0.19
AlyrefO08583 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
AlyrefO08583 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
AlyrefO08583 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AlyrefO08583 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AlyrefO08583 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
AlyrefO08583 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AlyrefO08583 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AlyrefO08583 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AlyrefO08583 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms