Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm8825-201ENSMUST00000182565 998 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm4518-201ENSMUST00000182638 718 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm18622-201ENSMUST00000219361 595 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Gm5867-201ENSMUST00000063197 592 ntBASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim34bJ3QNR8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim34bJ3QNR8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Gm8000-201ENSMUST00000188378 592 ntBASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Psmb5-202ENSMUST00000227257 622 ntBASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim34bJ3QNR8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim34bJ3QNR8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
Trim34bJ3QNR8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim34bJ3QNR8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.64■□□□□ 0.74
Trim34bJ3QNR8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim34bJ3QNR8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34bJ3QNR8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms