Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sgo2bJ3QMK1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sgo2bJ3QMK1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.09■□□□□ 0.17
Sgo2bJ3QMK1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sgo2bJ3QMK1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sgo2bJ3QMK1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Sgo2bJ3QMK1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.08■□□□□ 0.17
Sgo2bJ3QMK1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sgo2bJ3QMK1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Mir770-201ENSMUST00000103252 94 ntBASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sgo2bJ3QMK1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Sgo2bJ3QMK1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sgo2bJ3QMK1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms