Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc149F6V035 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.32■□□□□ 0.2
Ccdc149F6V035 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.32■□□□□ 0.2
Ccdc149F6V035 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc149F6V035 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.31■□□□□ 0.2
Ccdc149F6V035 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Gm6089-201ENSMUST00000197666 938 ntBASIC16.31■□□□□ 0.2
Ccdc149F6V035 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc149F6V035 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.3■□□□□ 0.2
Ccdc149F6V035 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc149F6V035 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.29■□□□□ 0.2
Ccdc149F6V035 Gm11780-201ENSMUST00000136880 516 ntBASIC16.29■□□□□ 0.2
Ccdc149F6V035 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc149F6V035 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc149F6V035 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.29■□□□□ 0.2
Ccdc149F6V035 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms