Protein–RNA interactions for Protein: E9Q3L6

4930579F01Rik, RIKEN cDNA 4930579F01 gene, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930579F01RikE9Q3L6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.58□□□□□ -0.07
4930579F01RikE9Q3L6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
4930579F01RikE9Q3L6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
4930579F01RikE9Q3L6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
4930579F01RikE9Q3L6 Flg-201ENSMUST00000050758 1488 ntBASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
4930579F01RikE9Q3L6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Gm22325-201ENSMUST00000158904 308 ntBASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
4930579F01RikE9Q3L6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Gm5643-201ENSMUST00000117081 966 ntBASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
4930579F01RikE9Q3L6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
4930579F01RikE9Q3L6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.55□□□□□ -0.08
4930579F01RikE9Q3L6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
4930579F01RikE9Q3L6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
4930579F01RikE9Q3L6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
4930579F01RikE9Q3L6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
4930579F01RikE9Q3L6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms